Isolation and sequence analysis of a cdna encoding a novel putative esterase from the marine microalga isochrysis galbana (prymnesiophyceae, haptophyta)1

Abstract : Microalgae constitute an interesting novel study area for characterizing new esterases, and so we decided to isolate a complete cDNA encoding a new putative microalgal esterase from the haptophyte Isochrysis galbana Parke. Rapid amplifications of both the 5′ and 3′ cDNA ends (RACE) were performed with specific primers, designed using an incomplete candidate gene from the I. galbana expressed sequence tag (EST) database. The full-length cDNA obtained was designated IgEst1. The coding sequence was 828 bp long, and the deduced amino acid sequence revealed a polypeptide of 275 amino acids with a predicted signal peptide of 23 residues in the N-terminal region. The following 252 amino acids formed, after in silico analysis, a mature protein with a molecular mass of ∼26.92 kDa and had a theoretical pI of 5.87. Alignment analyses revealed slight but significant identity and similarity with carboxylesterases, phospholipases, and lysophospholipases from various organisms including fungi, plants, and animals. The new sequence IgEst1 enclosed the catalytic triad Ser/Asp/His and the consensus pentapeptide Gly-X-Ser-X-Gly, two highly conserved patterns found in serine hydrolases. Phylogenetic analyses established a close relationship with putative esterases identified in microalgae genomes.
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Journal of Phycology, Wiley, 2010, 46 (4), pp.679-684. 〈10.1111/j.1529-8817.2010.00838.x〉
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Soumis le : vendredi 7 septembre 2012 - 15:44:47
Dernière modification le : mercredi 21 mars 2018 - 16:08:10

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Stéphanie Godet, C. Loiseau, G. Pencreac'H, F. Ergan, J. Herault. Isolation and sequence analysis of a cdna encoding a novel putative esterase from the marine microalga isochrysis galbana (prymnesiophyceae, haptophyta)1. Journal of Phycology, Wiley, 2010, 46 (4), pp.679-684. 〈10.1111/j.1529-8817.2010.00838.x〉. 〈hal-00729548〉

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